- inbox_lanes, inbox_dismiss_candidates, inbox_export_csv: switch
module-level 'app' to per-request 'request.app' so per-endpoint
state stays consistent with the test's TestClient target across
importlib.reload() (test_api.py::test_cors_extra_origins_via_env
reloads the api module to mutate CORS allow-lists; pre-reload
endpoints then mutate the wrong app instance).
- _http_exc_handler: when HTTPException.detail is a dict, wrap under
'detail' so the standard envelope stays stable and callers can
branch on body['detail']['error'].
- conftest._auto_init_db: re-resolve cyclone.api.app each fixture
invocation (instead of caching at module load) so the reload pattern
doesn't leave event_bus set on a stale app.
- test_acks.test_migration_latest_idempotent_on_fresh_db: bump
user_version assertion from 12 to 14 after auth migration renumber
(0013 users+sessions, 0014 audit_log.user_id).
Also installs sqlcipher3 + paramiko into the backend venv so the
capability tests can run; both modules were optional deps that
test_db_crypto and test_sftp_paramiko assume are present.
Backend test results: 1008 passed, 9 skipped (gitignored prodfile
fixtures), 0 failed.
Adds automated encrypted backups of the live SQLite file. Closes the
'no backup automation' gap called out in the completeness review
(docs/reviews/2026-06-20-cyclone-completeness-review.md §3.1 #3) and
gives the SP16 MFT scheduler a recovery path when the MFT pipeline
loses days of inbound 999/277CA work in a single crash.
Architecture
------------
- AES-256-GCM with PBKDF2-HMAC-SHA256 (200,000 iters, 16-byte salt)
- Online backups via SQLite's .backup() API — no app downtime
- Salt + passphrase persisted to macOS Keychain (separate accounts
backup.passphrase + backup.salt) so the key is reproducible across
processes
- Two-step restore (initiate → confirm) with a one-shot 64-char hex
token; the second call disposes + rebuilds the engine only if the
token matches within a 5-minute TTL
- Tamper-evident audit chain (SP11) — db.backup_created,
db.backup_failed, db.backup_pruned, db.backup_restored,
db.backup_passphrase_set
- BackupService + BackupScheduler + module-level singletons
- 8 admin endpoints + 6 CLI subcommands
- Auto-start opt-in via CYCLONE_BACKUP_AUTOSTART=true; default
interval 24h, default retention 30 days
- Fallback posture: if no separate passphrase is set and SQLCipher
is enabled, the key is derived from the SQLCipher DB key with a
fixed salt + WARNING log (degraded but never plaintext)
New modules
-----------
- cyclone.backup — PBKDF2, AES-GCM, sidecar format
- cyclone.backup_service — create_now / list / verify / restore / prune / status
- cyclone.backup_scheduler — async tick loop with audit hooks
New surface
-----------
- 8 admin endpoints under /api/admin/backup/*
- 6 CLI subcommands under cyclone backup (init-passphrase, create,
list, verify, restore, prune, status)
- Migration 0012_backups.sql + DbBackup ORM
- store.add_backup_pending()
Tests
-----
- 14 unit tests in test_backup_crypto.py (key derivation, encrypt/
decrypt round-trip, tampered ciphertext, wrong passphrase, sidecar
round-trip, filename format)
- 19 tests in test_backup_service.py (create/list/verify/restore/
prune/status, error handling, fallback key, module singleton)
- 14 API tests in test_api_backup.py (all 8 endpoints + scheduler
endpoints, two-step restore, error responses)
- 10 tests in test_backup_scheduler.py (tick / start / stop /
audit / coalescing / module singleton)
- 5 CLI tests in test_cli_backup.py (create / list / verify /
restore confirm prompt / prune confirm prompt /
init-passphrase minimum-length check)
Total new tests: 62. All pass. Full backend suite: 833 passed,
9 skipped (gitignored prodfiles), 1 warning.
Design doc: docs/superpowers/specs/2026-06-21-cyclone-encrypted-backup-design.md
README: new 'Encrypted Backups (SP17)' section, SP17 entry in
Roadmap, retention default documented in §Project layout.
Adds an asyncio-based background scheduler that polls the Gainwell
MFT inbound path, downloads new files, and routes them through the
appropriate parser (999 / 835 / 277CA / TA1). Idempotent (re-ticks
and restarts skip already-processed files via the new
processed_inbound_files table). Crash-safe (per-file try/except so
one bad file doesn't stop the loop).
Lifespan auto-configures from the seeded dzinesco clearhouse's SFTP
block; auto-start is opt-in via CYCLONE_SCHEDULER_AUTOSTART.
Five admin endpoints added:
GET /api/admin/scheduler/status
POST /api/admin/scheduler/start
POST /api/admin/scheduler/stop
POST /api/admin/scheduler/tick
GET /api/admin/scheduler/processed-files?status=&limit=
20 new tests (15 unit + 5 API).
Closes the gap between the SP10 backend (5 lanes) and the SP6
frontend (4 lanes). The Payer-Rejected lane (277CA STC A4/A6/A7)
is now rendered alongside Rejected/Candidates/Unmatched/Done,
with an Acknowledge bulk action that drops claims from the
working surface without erasing the original 277CA rejection
event (audit log stays intact, SP11).
Backend:
* Migration 0010: add payer_rejected_acknowledged_at +
payer_rejected_acknowledged_actor columns + partial index.
* db.py: surface the two new columns on the Claim model.
* inbox_lanes.py: filter acknowledged claims out of the
payer_rejected lane; expose the new fields on the row payload
for forward-compat (e.g. a future 'Recently acknowledged' view).
* api.py:
- POST /api/inbox/payer-rejected/acknowledge
Bulk-acknowledge. Idempotent. Returns transitioned /
already_acked / not_found / not_rejected counts so the UI
can show '3 of 5 were already acknowledged' on a noop bulk.
Writes a 'claim.payer_rejected_acknowledged' event to the
SP11 hash-chained audit log.
- GET /api/inbox/export.csv: accept 'payer_rejected' lane.
* test_acks.py: bump user_version assertion to 10.
* test_lane_filter_acknowledged.py: 4 tests for the lane filter
and forward-compat row payload.
* test_payer_rejected_acknowledge.py: 6 tests for the endpoint
(happy path, idempotency, no-op on non-rejected, missing
ids, 400 on empty, audit-log wiring + chain integrity).
Frontend:
* lib/inbox-api.ts: add payer_rejected to InboxLanes, add
acknowledgePayerRejected(), update exportInboxCsvUrl union.
* hooks/useInboxLanes.ts: add payer_rejected to initial state.
* hooks/useInboxLanes.test.ts: add payer_rejected to mocks.
* components/inbox/BulkBar.tsx: add 'payer_rejected' lane with
Acknowledge action (no Resubmit, no Dismiss — payer-rejected
is not eligible for either).
* components/inbox/BulkBar.test.tsx: add payer_rejected test.
* pages/Inbox.tsx: render the 5th lane, hook up onAcknowledge,
include payer_rejected in the needEyes count.
* pages/Inbox.test.tsx: 3 new tests (5-lane render, need-eyes
count, acknowledge action hits the right endpoint).
* components/inbox/InboxHeader.tsx: doc comment now explains
why payer_rejected rolls up into need-eyes.
Pre-existing typecheck warnings in BulkBar.test.tsx / InboxRow
.test.tsx / Lane.tsx / download.test.ts are unchanged from
main — not touched here.
Test counts: backend 724 -> 734 (+10). Frontend 350 -> 354 (+4).
Adds:
- claims.rejection_reason, claims.rejected_at, claims.resubmit_count
- claims.state_changed_at (was missing, needed for Done-today lane)
- ix_claims_state_changed_at composite index
Also fixes the ClaimState count assertion in test_db_models.py
(7 → 8) to match the REJECTED enum value added in the previous
commit, and bumps the user_version expectation in test_acks.py
(3 → 4) for the same reason.
Three related changes for real CO Medicaid data:
1. Drop UNIQUE(batch_id, patient_control_number) on claims and
UNIQUE(batch_id, payer_claim_control_number) on remittances. The X12
spec allows multiple CLM segments per 2000B subscriber loop and 835
ERAs can repeat a payer_claim_control_number for reversals. Claim/
remittance identity is provided by the primary key (claims.id = CLM01,
remittances.id = CLP01).
2. Add validator rule R835_MULTI_BPR warning for files with multiple BPR
segments (CO Medicaid split-payment pattern). The parser already sums
BPR02 paid_amounts; this surfaces the non-standard data to operators.
3. Skip R835_BAL_BPR_vs_CLP04 when BPR01='I' (Information Only 835).
In that mode BPR02 is informational and the per-claim CLP04 totals
are authoritative — a diff is expected, not an error.
Migration 0003 handles the drop with IF EXISTS so fresh DBs skip cleanly.
Updates affected tests to reflect new schema (no UNIQUE constraint on
batch_id + patient_control_number / payer_claim_control_number).
Fixes test_api_835::test_prodfile_round_trip_persists_separately which
was failing on real production data.
Nora
Tyler